AMBER (Assisted Model Building with Energy Refinement)

AMBER (Assisted Model Building with Energy Refinement) is a computational tool used by scientists to create and study detailed models of biological molecules like proteins and DNA. It simulates how these molecules behave and interact by calculating their physical energies. This helps researchers predict how molecules fold, bind, or change shape, which is essential for understanding their functions and designing new drugs. In essence, AMBER provides a virtual environment to refine the structure and dynamics of biological molecules, aiding in the exploration of their complex behavior with high accuracy.